Showing posts with label Books. Show all posts
Showing posts with label Books. Show all posts

Monday, April 27, 2026

How a Book Pulled Me from Microbiology to Engineering

I am at the age where I find myself looking back, trying to work out why I made the certain decisions I made. Some of them I understood at the time. Most I did not. Careers, in particular, for me anyways, came out of a series of stuff I tried and realized I did not like, so my story is more a series of wrong turns than a plan. When I look honestly at how it started, with me ending up in engineering instead of medicine, one thing keeps coming back: a book.

In my senior year as a microbiology major at UMass Amherst, I signed up for a molecular genetics course. The required text was the 1978 second edition of Gunther Stent’s Molecular Genetics: An Introductory Narrative, coauthored with Richard Calendar. I expected another biology book. What I got was something closer to a systems manual.

Dr. Stent did not write like a biologist. He wrote like an engineer who happened to be studying cells. He walked through gene regulation, replication, mutation, and phage behavior the way you would walk through a circuit: inputs, outputs, feedback, control points, and mechanisms you could draw on paper. He started with the experiments that produced the model, then built the model. Chapter by chapter the book treated the cell as a system you could analyze if you respected the rules. Dr. Stent had spent his career in the phage group around Max Delbrück, and that physics-trained mindset showed. Most textbooks of that era listed facts. Dr. Stent described how the field figured the facts out, which meant you understood why the model looked the way it did instead of memorizing it.

That book is where the transition started. I have told my students for years that system is a big word. A system is the difference between a pile of facts and a working understanding of something. Dr. Stent happened to come along at the moment I had finally accumulated enough background in biology, chemistry, and math to start seeing things at the system level. Without that book at that time, I am not sure I would have made the leap. With it, the leap felt almost obvious.

The summer after graduation I reread the book on the beach. I also worked through The Double Helix, James Watson’s account of the race to figure out DNA structure. Dr. Stent gave me the mechanism, Dr Watson the connection. I was hooked, though not yet on what.

That fall I started in a hospital clinical microbiology lab, planning to save money and apply to medical school. I plated cultures, ran sensitivities, and read Gram stains. I was OK at the work. Just OK. I figured out fairly quickly that I did not like it and needed a change. The IBM PC came out in 1981 and we got one in the lab. Around the same time the lab brought in a Vitek system for automated bacterial identification and susceptibility testing. Vitek came out of a NASA-McDonnell Douglas effort to detect microbial contamination on the Voyager spacecraft. Test cards held the biochemistry, an optical scanner read the cards, and software interpreted the patterns. I spent every spare minute learning how it worked, end to end. In 2012 I wrote about that experience here. Dr. Stent’s book kept rattling around at the same time. Biological systems are the most complex engineering systems I know of, and once you have read someone describe them that way, you cannot unsee it. The cell, the card, and the computer were all the same kind of object to me by then.

After two years in the lab I decided hospital work was not for me and went back to school full time. I moved to second shift so I could take engineering courses during the day. I wrote about that decision, and my friend Doug who hired me into the lab and supported the move, here. I finished an MS in Electrical Engineering at Western New England University. From there I spent decades consulting on and designing communications systems, teaching engineering, technology, and telecommunications courses, and directing a couple of NSF Centers of Excellence. Medical school never happened.

Dr. Stent died in 2008. His textbook is long out of print and the science has moved well past 1978. A copy lives on the Internet Archive at archive.org. It still reads like an engineering text written by someone who happened to be studying cells.

My copy is in a box in my cellar somewhere. I have not opened it in years, but I guarantee that if I shake it over a sheet of paper, beach sand will fall out. I’m digging it out and plan to reread it this summer, hopefully at least part of it back on a beach. One book did not decide my career on its own, but it planted a seed, and the rest was me catching up to what I had already started reading for fun. 

So thank you, Dr. Stent. You died in 2008 and I doubt you thought a microbiology senior in western Massachusetts would read your book on a beach and change his life because of it. But you wrote the stuff that pointed me toward the stuff I actually wanted to do. You were one of several people whose work or example bent my path in a meaningful way. I will continue to write about the others here every once in a while too. 

Tuesday, June 17, 2008

Do E-books Smell Like Burned Fuel?

BookExpo America ran their annual conference a couple of weeks ago in New York City with some interesting, and controversial, presentations and statements. Here's some highlights from various sources. Let's start with some industry eco-footprint stats from Business Week:

- 8.9 pounds of emissions per book.
- 30 million trees consumed per year by the industry.
- Recycled paper is now used for 13% of book pages.

There was a lot of discussion about increasing the use of recycled paper and cutting back on the number of trees consumed for book and then things shifted to electronic-books (e-books). Amazon CEO Jeff Bezos got some discussion going with a talk about the Kindle but, according to Yahoo News, his talk disappointed many attendees, who had hoped that he would announce some major news, but it did continue the ongoing discussion of the e-future.

Publisher Simon & Schuster did announce they would make thousands of additional titles available on the Kindle, including "Fahrenheit 451" by Ray Bradbury. Bradbury, who was at the Expo, is quoted in the Yahoo News piece saying "There is no future for e-books because they are not books....... E-books smell like burned fuel."

Also according to Yahoo News, the industry is in transition - new annual releases keep increasing (more than 276,000, according to researchers R.R. Bowker), while the number of books purchased is expected to drop, according to a report by the Book Industry Study Group, an industry-supported organization. In addition, core American Booksellers Association (ABA) membership dropped to 1,524 as of this spring, 56 fewer than the year before, and booksellers filled less than half of the roughly 500 chairs set up for a meeting at the Expo.

I wonder what Guy Montag would have to say about all this!

Saturday, September 22, 2007

Book Bags and the Sony Reader

I've been meaning to weigh my daughters book bags for a while now. I've got a 16 year old in 11th grade and a 12 year old in 7th grade and each lug a stuffed bag back and forth every day to school. Here's the weigh-in results:

11th grader
Book Bag Weight = 28 lbs
Her Weight = 105 lbs
===============
Book Bag to Weight Ratio (BBWR) = (28 lbs)/(105 lbs) =
.267

7th Grader
Book Bag Weight = 24 lbs
Her Weight = 75 lbs

===============

Book Bag to Weight Ratio (
BBWR) = (24 lbs)/(75 lbs) = .32

So my oldest is lugging a little over one-quarter of her weight around in her book bag and my youngest is lugging almost one-third of her weight!
In addition they are each commonly carrying one or two other books that won't fit in their bags, adding another 5-10 pounds along with a 5-6 pound violin..... imagine if they each played the tuba........

I'm not sure how you feel about this but to me it is unacceptable. We've tried talking each into roller bags but they are not very popular these days in the middle and high schools..... So - what can we do? Get our kids memberships to a local gym in the summer so they can build up their muscles for the school year? Perhaps chiropractor gift certificates for the holidays?

Sony has a better solution that I'm hoping catches on in the academic community. The Sony Reader is one-half inch thick e-book reader that weighs around 8 ounces. It holds about 80 books worth of content and has a rechargeable battery that lasts approximately 7,500 page turns. It has 64MB of internal memory and an additional memory card slot. The screen is very pleasant on the eyes, using a technology called e Ink® from E Ink Corporation. E Ink uses micro-capsules instead of the glowing LCD cells on computer screens that appear as black or white depending on the charge associated with page content. According to Sony:

"The result is a reading experience that’s similar to paper - high contrast, high resolution, viewable in direct sunlight and at a nearly 180-degree angle, and requiring no power to maintain the image."

It also displays Microsoft Word and PDF documents, blogs, newsfeeds, and JPEGs (just black and white) and plays unsecured MP3 and AAC audio files (like Mike Q and my podcasts !) through an external audio jack.

Here's an interesting video from NY1 News on the Sony Reader.


I've spent some time in the Sony Style Store playing with one and an impressed with the contrast - it has a nice text-on-paper feel that I don't get with other readers that use standard computer screens. It's small when compared to academic textbooks at 6.9” by 4.9” with a 6" screen and would probably not work well for textbooks with lots of illustrations - think biology or physics.

In it's current form factor, I think it would have limited use in the classroom but I'd love to give it a try. Sony appears to be directing marketing towards travelers at this time - I've seen a few ads in airports and airline magazines recently. Right now the cost is $279.99 and comes with 100 book's Classics titles.


In addition to Sony, there have been rumors Amazon has their own e-book reader in the works, the result of the purchase of
mobipocket.com a couple of years ago.

I'd love to see these kinds of products directed towards the academic market so my kids could both lower their BBWR!

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Read Show Notes and listen to Mike Q and my latest Podcast titled Micro-blogging linked here.
Podcasts also free on iTunes.
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